Structure of 126717-59-7
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CAS No. : | 126717-59-7 |
Formula : | C7H8BrNO |
M.W : | 202.05 |
SMILES Code : | BrC1=CC=C(N=C1C)OC |
MDL No. : | MFCD03094943 |
InChI Key : | VWNXCCTWVAQAPL-UHFFFAOYSA-N |
Pubchem ID : | 10798146 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 10 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.29 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 2.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 43.39 |
TPSA ? Topological Polar Surface Area: Calculated from |
22.12 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.39 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.25 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.16 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.65 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
2.46 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.18 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.89 |
Solubility | 0.261 mg/ml ; 0.00129 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-2.35 |
Solubility | 0.901 mg/ml ; 0.00446 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.4 |
Solubility | 0.081 mg/ml ; 0.000401 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.93 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.77 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With N-Bromosuccinimide; 2,2'-azobis(isobutyronitrile); acetic acid; In tetrahydrofuran; for 12h;Reflux; | The compound <strong>[126717-59-7]3-bromo-6-methoxy-2-methylpyridine</strong> (15 g, 0.076 mol), N-bromosuccinimide (40 g, 0.22 mol),Tetrahydrofuran (100 mL), acetic acid (7.5 mL),Azobisisobutyronitrile (0.45 g, 2.7 mmol) was added to a 500 ml single-mouth flask equipped with a reflux apparatus, and the reaction system was heated to reflux for 12 hours.Cool to room temperature and add ethyl acetate (150 mL).Adjust the pH to about 8 with a saturated aqueous solution of sodium bicarbonate (40 mL).The organic phase was washed with saturated brine (30 mL) and dried over anhydrous sodium sulfate.Dry to give a clear oily mixture of compound 3-bromo-2-(dibromomethyl)-6-methoxypyridine and 3-bromo-2-(bromomethyl)-6-methoxypyridine (26 g ),Used directly in the next step. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
92% | A solution of 2-methoxy-5-bromo-6-picoline (73 wt % solution in toluene,3.17 kg, 11.45 moles) in THF (18.3 L) was cooled to -60 C and treated with 2.5 N n-butyllithium in hexanes (4.87 L, 12.2 mol, 1.06 eq). After 0.5 h, dimethylformamide (1.76 L, 22.8 mol, 2.0 eq) was charged at <-50 C. After warming to ambient temperature, an aqueous solution of ammonium chloride (1.6 kg/16.2 L water) was charged and the layers separated. The aqueous phase was re-extracted with methyl ^-butylether (3.3 L) and the combined organic extracts were washed with saturated brine (2.5 L). There was a total of 22.4 kg of organic solution (7.08 wt %) corresponding to a 92% solution yield. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
63% | Example 3 3-(2,5-Dimethyl-6-oxo-1 6-dihydropyridin-3-(at)l)benzonitrile Step 1: 3-Bromo-6-methoxy-2-methylpyridine: A mixture of 5-bromo-6-methyl-1H-pyridin- 2-one (5.5 g, 29 mmol), silver carbonate (10.89 g, 39 mmol), iodomethane (13.6 mL, 217 mmol) and chloroform (115 mL) is stirred overnight in the dark at room temperature. Triethylamine (10 mL) is added and stirring continued for 1.5 hr. The reaction mixture is filtered through a pad of Hi-Flo and the filtrate is washed with water (100 mL), dried, filtered and concentrated. The residue is purified by filtration through a pad of silica gel washing with cyclohexane-20% ethyl acetate. The solvent is concentrated to afford 3-bromo-6-methoxy-2- methylpyridine (3.7 g, 63% yield) as an oil. LC/MS RT 3.76 min; MS m/e = 202/204 (M); NMR (CDCl3) 7.6 (1H, d), 6.43 (lH, d), 3.89 (3H, s), 2.57 (3H, s). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
76% | Step B. 3-Bromo-6-methoxy-2-methyl-pyridine. A mixture of 2-methoxy-6-methyl-pyridine (15.2 g, 123 mmol) and 1,3-dibromo-5,5-dimethyl hydantoin (35.3 g, 123 mmol) in THF (1 L) was stirred at rt for 48 h in the dark. The mixture was treated with 10% aq. Na2S2O3 (100 mL) and stirred for 1 h. The mixture was extracted with Et2O. The organic layer was washed with H2O (2*), dried (MgSO4), and concentrated. The residue was purified (SiO2; 0-5% EtOAc/hexanes) to give the title compound (18.7 g, 76%). MS (ESI): mass calcd. for C7H8BrNO, 200.98; m/z found, 202.2 [M+H]+. 1H NMR (CDCl3): 7.60 (d, J=8.6, 1H), 8.45 (d, J=8.7, 1H), 3.90 (s, 3H), 2.54 (s, 3H). | |
With potassium hydroxide; tetraethylammonium chloride; bromine; potassium bromide; In water; at 0 - 20℃; for 17.6667h; | (2) Synthesis of 3-bromo-6-methoxy-2-methylpyridine 15.3g of 2-methoxy-6-methylpyridine was dissolved in 100ml of potassium bromide aqueous solution, prepared that 50.1g of potassium bromide was dissolved in 200ml of water, 11.9g of potassium hydroxide and 40g of tetraethylammonium chloride were added. The solution of 7.6ml of bromine in 100ml of potassium bromide aqueous solution was added in on ice-cooling to the reaction liquid using a dropping funnel for 40 minutes. After completion of dropping, an ice bath was removed, which was stirred for 17 hours at room temperature. Sodium sulfite aqueous solution and ethyl acetate were added to reaction liquid, and the organic layer was separated. The resulting organic layer was washed with brine and then dried over anhydrous magnesium sulfate. After removing the drying agent by filtration, the organic layer was concentrated under a reduced pressure to give 19.6g of the title compound. 1H-NMR(CDCl3) delta (ppm): 2.56 (s,3H), 3.89 (s, 3H), 6.45 (d, 1H, J=8.0Hz), 7.60(d, 1H, J=8.0Hz). | |
With bromine; In disodium hydrogen phosphate; | (18-1) 2-Methoxy-6-methylpyridine (10 mL, 81 mmol) was suspended in a 0.15 mol//L disodium hydrogen phosphate aqueous solution (160 mL). Thereafter, a solution prepared by suspending bromine (4.15 mL, 81 mmol) in a 0.15 mol//L disodium hydrogen phosphate aqueous solution (160 mL) was added dropwise to the suspension at room temperature over 1 hour. The reaction solution was stirred at the same temperature as described above overnight. Thereafter, the reaction solution was extracted with methylene chloride (300 mL) three times. Organic layers were gathered. The resultant was dried over anhydrous magnesium sulfate and was then filtrated, followed by vacuum concentration. The obtained residue was distilled away under reduced pressure (91 C.-96 C./16 mmHg), so as to obtain 9.47 g of 3-bromo-6-methoxy-2-methyl-pyridine. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
70% | With 3-chloro-benzenecarboperoxoic acid; In chloroform; at 5 - 50℃; for 19h; | Step C. 3-Bromo-6-methoxy-2-methyl-pyridine N-oxide. A 5 C. solution of <strong>[126717-59-7]3-bromo-6-methoxy-2-methyl-pyridine</strong> (20.8 g, 103 mmol) in CHCl3 (550 mL) was treated with mCPBA (60%; 44.4 g, 154 mmol) slowly in portions over 1 h. The mixture was allowed to warm to rt, and then was heated at 50 C. for 18 h. The mixture was cooled to rt, treated with 5% aq. Na2CO3 (300 mL), and stirred for 1 h. The mixture was diluted with DCM and washed with H2O (3*). The organic layer was separated, dried (MgSO4), and concentrated to a light yellow oil (26.9 g). The oil was purified (SiO2; 0-5% 2 M NH3 in MeOH/DCM) to give the title compound (15.7 g, 70%). MS (ESI): mass calcd. for C7H8BrNO2, 216.97; m/z found, 218.2 [M+H]+. 1H NMR (CDCl3): 7.44 (d, J=8.9, 1H), 6.68 (d, J=9.0, 1H), 4.05 (s, 3H), 2.74 (s, 3H). |
52% | With 3-chloro-benzenecarboperoxoic acid; In chloroform; at 0 - 20℃; for 48h; | To a solution of <strong>[126717-59-7]3-bromo-6-methoxy-2-methylpyridine</strong> (5 g, 24.75 mmol) in chloroform (100 mL) was added mCPBA (8.52 g, 49.37 mmol) in portions at 0 C. The resulting mixture was stirred at room temperature for 2 d. The reaction mixture was then diluted with sat. NaHCO3 solution (200 mL) and was extracted with dichloromethane (250 mL*2). The combined organic phase was washed with brine and dried over sodium sulfate. The solvent was removed under reduced pressure and the residue was purified by flash chromatography eluting with methanol in dichloromethane (1% to 5% gradient) to yield <strong>[126717-59-7]3-bromo-6-methoxy-2-methylpyridine</strong> 1-oxide as yellow solid (2.8 g, 52%). MS: m/z=217.9 [M+H]+. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
15.5 g | The compound <strong>[126717-59-7]3-bromo-6-methoxy-2-methylpyridine</strong> (15 g, 0.076 mol), N-bromosuccinimide (40 g, 0.22 mol),Tetrahydrofuran (100 mL), acetic acid (7.5 mL),Azobisisobutyronitrile (0.45 g, 2.7 mmol) was added to a 500 ml single-mouth flask equipped with a reflux apparatus, and the reaction system was heated to reflux for 12 hours.Cool to room temperature and add ethyl acetate (150 mL).Adjust the pH to about 8 with a saturated aqueous solution of sodium bicarbonate (40 mL).The organic phase was washed with saturated brine (30 mL) and dried over anhydrous sodium sulfate.Dry to give a clear oily mixture of compound 3-bromo-2-(dibromomethyl)-6-methoxypyridine and 3-bromo-2-(bromomethyl)-6-methoxypyridine (26 g ),Used directly in the next step.3-Bromo-2-(dibromomethyl)-6-methoxypyridine in sequence at room temperaturea mixture with 3-bromo-2-(bromomethyl)-6-methoxypyridine (26 g),Anhydrous tetrahydrofuran (100 mL), N,N-diisopropylethylamine(25.8 mL, 0.19 moL), added to a 500 ml three-neck bottle,Nitrogen protection, cooling to 0 C, diethyl phosphite(18.6 mL, 0.14 mol) was added dropwise to the reaction system.After completion, the reaction solution was stirred at normal temperature for 12 hours.Ethyl acetate (200 mL) was added to the reaction system.Wash twice with saturated brine (20 mL) and dry over anhydrous sodium sulfate.Spin dry, pass through the column (petroleum ether (v) / ethyl acetate (v) = 50:1)3-bromo-2-(bromomethyl)-6-methoxypyridine (15.5 g, two-step yield: 77%)Transparent oil. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
(3) The synthesis of 6-methoxy-2-methylpyridine-3-boronic acid 21.2g of <strong>[126717-59-7]3-bromo-6-methoxy-2-methylpyridine</strong> was dissolved in 100ml of anhydrous tetrahydrofuran, 79ml of n-butyllithium (1.6M hexane solution) was added dropwise for 30 minutes at -70 C under nitrogen atmosphere. After dropping, stirring was carried out for 30 minutes at -70 C, a solution of 37ml of triisopropyl borate in 50ml of anhydrous tetrahydrofuran was added dropwise for 40 minutes at -70 C. After completion of dropping, dry ice-acetone bath was removed, which was stirred for 16 hours at room temperature. Afterwards, 12ml of acetic acid was added at room temperature followed by stirring for another hour. Water and ethyl acetate were added to reaction liquid, and the organic layer was separated. The resulting organic layer was washed with brine and then dried over anhydrous magnesium sulfate. After removing the drying agent by filtration, the organic layer was concentrated under a reduced pressure, and recrystallized from diethyl ether to give 6.31g of the title compound. |
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