Structure of 2622-63-1
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CAS No. : | 2622-63-1 |
Formula : | C14H12N2 |
M.W : | 208.26 |
SMILES Code : | CN1C2=CC=CC=C2N=C1C3=CC=CC=C3 |
MDL No. : | MFCD00005764 |
InChI Key : | POSRBSJJCMKQNU-UHFFFAOYSA-N |
Pubchem ID : | 75807 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H317-H319 |
Precautionary Statements: | P280-P305+P351+P338 |
Num. heavy atoms | 16 |
Num. arom. heavy atoms | 15 |
Fraction Csp3 | 0.07 |
Num. rotatable bonds | 1 |
Num. H-bond acceptors | 1.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 66.43 |
TPSA ? Topological Polar Surface Area: Calculated from |
17.82 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.3 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
3.1 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.24 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
3.07 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.02 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.95 |
Log S (ESOL):? ESOL: Topological method implemented from |
-3.71 |
Solubility | 0.0404 mg/ml ; 0.000194 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.14 |
Solubility | 0.15 mg/ml ; 0.000721 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-5.0 |
Solubility | 0.0021 mg/ml ; 0.0000101 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
Yes |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
Yes |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
Yes |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
Yes |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.37 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.65 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With 1,8-diazabicyclo[5.4.0]undec-7-ene; In dichloromethane; | EXAMPLE 4 Preparation of 1-Methyl-2-Phenylbenzimidazole Using DBU To a mixture of 2-phenylbenzimidazole (1.02 g, 5.25 mmol) in DMC (10 mL), DBU (0.80 g, 5.25 mmol) was added and the resulting mixture was heated to reflux (90° C.) for 6 hours. The solvent was evaporated under vacuum and the resulting oil was dissolved in methylene chloride (2 mL) and filtered through silica gel (2:1 EtOAc/hexane). The solvent was evaporated under vacuum to afford 1-methyl-2-phenylbenzimidazole as a solid. The yield of 1-methyl-2-phenylbenzimidazole as determined by HPLC analysis was 98percent conversion. | |
EXAMPLE 5 Preparation of 1-methyl-2-phenylbenzimidazole Using Dabco.(TM). To a mixture of 2-phenylbenzimidazole (2.02 g, 10.4 mmol) in DMC (10 mL), Dabco.(TM). (1.17 g, 10.4 mmol) was added and the resulting mixture was heated to reflux (90° C.) for 3 hours. The yield of 1-methyl-2-phenylbenzimidazole as determined by HPLC analysis was 99percent conversion. | ||
With dmap; In N,N-dimethyl-formamide; | EXAMPLE 6 Preparation of 1-Methyl-2-phenylbenzimidazole Using DMAP To a mixture of 2-phenylbenzimidazole (2.02 g, 10.4 mmol) in DMC (10 mL) and DMF (5 mL), DMAP (1.27 g, 10.4 mmol) was added and the resulting mixture was heated to reflux (90° C.) for 4 hours. The yield of 1-methyl-2-phenylbenzimidazole as determined by HPLC analysis was 99percent conversion. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
95% | In N,N-dimethyl-formamide; for 0.0833333h;Microwave irradiation; | General procedure: 2 mmols of 1-methyl-2-aryllbenzimidazole was placed ina 100 mL round bottom flask. After adding 2 mL of DMF into the flask, 3 mmols of alkylhalide was added onto the mixture dropwise under stirring. Attaching with a reflux condenser, the reaction system was placed in the CEM-Mars6 multimode microwave synthesis system and exposed to 120 W microwaves. The progress and termination of the reaction was monitored by TLC with a mixture of methanol and chloroform (1:9) as the eluent. After termination of the reaction, the heterogenous mixture obtained was cooled to room temperature and then poured into diethyl ether (30mL). The precipitate was collected by filtration. Diethylether threatment was repeated two times in order to remove solvent residue. The insoluble light brown/beige solids obtained by filtration was allowed to crystallize in water. Compounds 8-28 were synthesised from appropriate 1-methl-2-arylbenzimidazole derivatives and alkyl halides using the same procedure. |
91% | In dichloromethane; at 30℃; for 17h; | Methylene chloride (20 mL) was added to 7 (3.00 g, 14.4 mmol) in a 50 mL round-bottom flask and stirred until fully dissolved. Iodomethane (2.7 mL, 43.4 mmol) was added and the mixture was stirred at 30 °C closed for 17 h. The solvent was evaporated at 45 °C using dynamic vacuum and diethyl ether was added. The solid was collected by vacuum filtration, washed with diethyl ether, and dried under vacuum at 40 °C, yielding HB (4.59 g, 91percent) as an off-white powder. 1H NMR (500 MHz, DMSO-d6, delta 8.15 (dd, J= 6.2, 3.1 Hz, 2H), 7.93 (d, J= 7.0 Hz, 2H), 7.88-7.73 (m, 5H), 3.91 (s, 6H). 13C NMR (125 MHz, DMSO-d6, delta: 150.29, 132.91, 131.68, 130.76, 129.42, 126.61,120.96, 113.39, 32.85. ESI-MS m/z calcd for C15H15N2+ [M+]: 223.123, found 223.124. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
85% | Powdered potassium hydroxide (2.24 g, 39.9 mmol) was added to a 250 mL round-bottom flask and vigorously stirred in DMSO (65 mL) for 30 min. A solution of 2- phenylbenzimidazole (4.11 g, 21.2 mmol) in DMSO (65 mL) was added to the basic DMSO solution and the mixture stirred for 45 min closed at room temperature. Iodomethane (1.4 mL, 22.5 mmol) was then added and the mixture stirred for 45 min. The mixture was then poured into a stirring solution of water (1.0 L) containing potassium hydroxide (5.0 g). Diethyl ether (300 mL) was then added and stirred until both layers were transparent. The organic layer was decanted and the same process was repeated with additional diethyl ether (2 x 200 mL). The combined organics were washed with water, brine, water, dried over magnesium sulfate, filtered, and evaporated at 44 °C under dynamic vacuum to yield 7 (3.74 g, 85percent) as a pale brown powder.1HNMR (500MHz, DMSO-d6, delta 7.86 (dd, J= 7.8, 1.7Hz, 2H), 7.69 (d, J= 7.9Hz,1H), 7.64-7.52 (m, 4H), 7.33-7.22 (m, 2H), 3.88 (s, 3H). 13C NMR (125 MHz, DMSOd 6, delta): 152.98, 142.47, 136.57, 130.15, 129.60, 129.28, 128.63, 122.32, 121.90, 118.98, 110.53, 31.64. | |
62% | Under an atmospheric nitrogen gas flow, sodium hydride in an amount of 12.8 mmol (containing 438 mg of 30 percent liquid paraffin) was placed into a three neck flask having a capacity of 100 milliliter, and adding n-pentane in an amount of 10 milliliter, the resultant solution was stirred at room temperature for 15 minutes. Subsequently, n-pentane was removed and then, after adding n-pentane again, the resultant solution was stirred. Repeating the above operation 4 times totally, the liquid paraffin was removed. Afterwards, the refined sodium hydride was vacume dried among the flask. Then, adding N,N-dimethylformamide in an amount of 15 milliliter and hpbi in an amount of 7.7 mmol (1.5 g), the resultant solution was stirred at a temperature of 35 °C for 1 hour and, further adding methyl iodide in an amount of 9.6 mmol (1.36 g), the resultant solution was further stirred at a temperature of 40 °C for 3 hours. After the resultant solution was cooled by leaving it standing, the solvent was removed by pressure reduction, and adding pure water, the resultant solution was stirred. Further, after adding dichloromethane, the resultant solution was divided by extraction. Gathering an organic layer, and after dehydration with the use of sodium sulfate, the solvent was concentrated by pressure reduction. A white precipitate generated by adding n-hexane was separated by filtration and 0.99 g of the aimed substance was obtained (yield: 62 percent). | |
49% | In acetone; at 20℃; for 6h; | The synthesis of 1-methyl-2-phenyl-1H-benzoimidazole (Mpb) is accomplished by referring to methods disclosed in Popov, 1. I., Chem. Heterocycl. Compd. (EN), 1996, 32, 6, p.672-681. The synthetic method is outlined in Scheme 1. To 20 mL acetone was added 2-phenyl-1H-benzoimidazole (1.94 g, 10 mmol), followed by the injection of iodomethane (1.42 mL, 12 mmol). The mixture was stirred at room temperature for 6 h, sodium hydroxide solution was then added, and the mixture reacted for an additional 5 min. The reaction mixture was extracted with dichloromethane. The organic layer was dried over magnesium sulfate and concentrated under reduced pressure. The residue was purified by column chromatography using n-hexanes/EA (v/v=80/20) as eluent. After the product was completely isolated, 1.03 mg (0.49 mmol) of the title compound was obtained (49percent yield). 1H NMR (CDCl3, delta): 3.87 (s, 3 H), 7.32-7.41 (m, 3 H), 7.51-7.56 (m, 3 H), 7.83-7.86 (m, 3 H). |
8 g | With potassium tert-butylate; In tetrahydrofuran; at 20℃; | 2-Phenyl-1H-benzo [d] imidazole (10 g, Tokyo Chemical Industry) was dissolved in dehydrated tetrahydrofuran (200 ml, Wako Pure Chemical Industries), potassium t-butoxide (6.07 g, Wako Junyaku), iodinated Methyl (3.85 ml, Wako Pure Chemical Industries, Ltd.) was added and the mixture was stirred overnight at room temperature. After the reaction, the reaction mixture was extracted with chloroform (Wako Pure Chemical Industries, Ltd.), washed twice with water, and the organic layer was recovered. The organic layer was dried with anhydrous sodium sulfate (Wako Pure Chemical Industries, Ltd.) and concentrated. The residue was purified by silica gel column chromatography to obtain 8 g of 1-methyl-2-phenyl-1H-benzo [d] imidazole. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | With copper(II) oxide; potassium carbonate; triphenylphosphine; In diethylene glycol dimethyl ether; at 160℃; for 24h;Reflux; Inert atmosphere; Sealed tube; | General procedure: 4.3 General procedure for CuO-catalyzed arylation and alkenylation of 1,3-azole (0012) Under argon, 0.5mmol of the bromobenzene or bromoalkene was added to the reaction mixture containing 0.25mmol of the benzoxazole, 0.5mmol K2CO3, 0.025mmol CuO, and 0.075mmol PPh3, followed by the addition of 2mL dry diglyme. The sealed reaction tube was stirred at 160°C for 5?24h. After cooling, the reaction mixture was centrifuged to remove solid and separated the organic phase. Then, organic phase was extracted and dried over anhydrous MgSO4, and concentrated under reduced pressure after filtered. The residue was purified by column chromatography on silica gel eluted to afford corresponding product. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With 10 molpercent nickel based 2,5-dihydroxyterephthalic acid metal organic framework-74; In diethylene glycol dimethyl ether; at 160℃; for 18h;Sealed tube; | General procedure: In a typical experiment, a predetermined amount of Ni-MOF-74 was added to the 8 mL vial containing a mixture of iodobenzene (0.1030 g, 0.5 mmol), benzothiazole (0.1379 g, 1.0 mmol), Li2CO3 or KCl (1.0 mmol), and diphenyl ether (0.085 g, 0.5 mmol) as standard. 1-Methoxy-2-(2-methoxyethoxy)ethane (diglyme) (1 mL) was added and vial was tightly capped. Reaction mixture was heated at 160°C for 24 h. The catalyst loading was based on the molar ratio of nickel/iodobenzene. The reaction yield was monitored by withdrawing aliquots from the reaction mixture at different time intervals, diluting with ethylacetate (2 mL), quenching with an aqueous KOH solution (1percent, 1 mL), and then drying over anhydrous Na2SO4 before analyzing by GC with reference to diphenyl ether (internal equation with pure product), and further confirming product identity by GC?MS and NMR. To investigatethe recycle ability of Ni-MOF-74, the catalyst was filtered from the reaction mixture after the experiment, washed with ethylacetate, water, THF, and dried at 140°C under vacuum in 8 h. For the leaching test, a catalytic reaction was stopped after 12 h, analyzed by GC, and filtered to remove the solid catalyst. The reaction solution was then stirred for a further 12 h. Reaction progress, if any, was monitored by GC as previously described. |
67% | With (1-(2-(tert-butylamino)ethyl)-3-mesityl-2,3-dihydro-1H-imidazol-2-yl)copper(I) iodide; lithium tert-butoxide; In N,N-dimethyl-formamide; at 140℃; for 8h;Glovebox; | General procedure: The product 12a is a representative reaction. To a vial (5 mL) containing caffeine (0.5 mmol), iodobenzene (1.0 mmol), catalyst 3e (0.05 mmol), and LiOtBu (1.0 mmol) was added DMF (1.0 mL) solvent under a glovebox atmosphere. After the substances were completely dissolved, the vial was screw-capped, taken outside the glovebox and heated at 140 °C for 8 h. The resulting mixture was filtered through Celite and washed with dichloromethane. The filtrate solution was concentrated in vacuo to afford the crude product, which was further purified by column chromatography using hexane/ethyl acetate as eluent to furnish 12a in 80percent yield. |
46% | With potassium phosphate; Cu2(4,4?-biphenyldicarboxylate)2(4,4?-bipyridine); In Hexadecane; N,N-dimethyl-formamide; at 120℃; for 3h;Green chemistry; | General procedure: In a typical experiment, a pre-determined amount of Cu2(BPDC)2(BPY) was added to theflask containing a solution of iodobenzene (0.112 mL, 1 mmol),benzoxazole (0.238 g, 2 mmol), K3PO4(0.532 g, 2 mmol) and n-hexadecane (0.1 mL) as internal standard in DMF (4 mL). Thecatalyst concentration was calculated based on the molar ratio ofcopper/iodobenzene. The reaction mixture was stirred at 100Cunder an argon atmosphere for 180 min. The reaction conver-sion was monitored by withdrawing aliquots from the reactionmixture at different time intervals, quenching with an aqueousNaOH solution (5percent, 1 mL), drying over anhydrous Na2SO4, analyz-ing by GC with reference to n-hexadecane, and further confirmingproduct identity by GC?MS. To investigate the recyclability ofCu2(BPDC)2(BPY), the catalyst was filtered from the reaction mix-ture after the experiment, washed with copious amounts of DMF,dried under air at room temperature for 1 h, and reused if neces-sary. For the leaching test, a catalytic reaction was stopped after30 min, analyzed by GC, and filtered to remove the solid catalyst.The reaction solution was then stirred for a further 150 min. Reac-tion progress, if any, was monitored by GC as previously described. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
90% | With potassium iodide; In N,N-dimethyl-formamide; at 80℃;Molecular sieve; | General procedure: Phenylenediamine (1.0 mmol),Benzaldehyde (1.1 mmol) and KI (166 mg, 1.0 mmol) were dissolved in 10 ml of DMF,The inlet of the reaction vessel was opened to form an atmosphere to be exposed to the air, and 4 A molricular sieve was added thereto to provide an anhydrous condition, followed by stirring at 80 °C.The reaction was terminated by checking the amount of phenylenediamine consumed. After cooling to room temperature, the solvent was distilled off under reduced pressure, and the reaction mixture was separated by column chromatography to obtain 176 mg of the target compound of the formula (4). Yield 91percent |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97% | With sodium metabisulfite; In N,N-dimethyl-formamide;Reflux; | 8.4 g of compound c1, 7 g of benzaldehyde, 13gSodium metabisulfite,200mL dimethylformamide was added to the reaction flask Medium, reflux overnight. After the reaction is finished, cool to room temperature.Pour the reaction solution into 500 mL of ice water with stirring.Solid precipitated, suction filtered, and washed with ethanol, petroleum ether,Drying gave a solid, Compound d1 (11.3 g, yield 97percent). |
94% | With Ag2CO3/celite; In ethanol; at 70℃; for 3h; | General procedure: To a mixture of 1,2-phenylenediamines (1.0 mmol) andaldehydes (1.1 mmol) in ethanol, 25 mol percent of Ag2CO3/Celite (3 mL) was added. The resulting mixture was stirredat 70 °C for 3 h. After this time, the reaction mixture wasdiluted with ethanol (50 mL) and the catalyst was separatedby filtration. Water was then added to the organic layer, andthe products were filtered and washed with water. All of theproducts are known compounds and characterized easily bycomparison with melting point, IR, [1?6] H NMR spectraldata reported in literature. |
90% | In water; N,N-dimethyl-formamide; at 80℃; | General procedure: An ortho-phenylenediamine derivative 3 (1.0 mmol; 1.0 equiv) and an aldehyde 4 (1.0 mmol; 1.0 equiv) were dissolved in wet DMF (DMF 9.0 mL, H2O 1.0 mL). The resulting reaction mixture was stirred at 80°C in an open flask, and the reaction progress was monitored by TLC. On the complete consumption of 3, the reaction mixture was cooled to room temperature and concentrated under reduced pressure. The crude product obtained was purified by column chromatography on silica gel to afford the corresponding benzimidazole 5. |
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