Structure of 3141-24-0
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The BI-3802 was designed by Boehringer Ingelheim and could be obtained free of charge through the Boehringer Ingelheim open innovation portal opnMe.com, associated with its negative control.
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CAS No. : | 3141-24-0 |
Formula : | C4HBr3S |
M.W : | 320.83 |
SMILES Code : | BrC1=CC(Br)=C(Br)S1 |
MDL No. : | MFCD00014521 |
InChI Key : | SKDNDSLDRLEELJ-UHFFFAOYSA-N |
Pubchem ID : | 76592 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302+H312+H332-H315-H319-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 8 |
Num. arom. heavy atoms | 5 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 0.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 47.42 |
TPSA ? Topological Polar Surface Area: Calculated from |
28.24 Ų |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.36 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
4.34 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
4.04 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
3.56 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
4.7 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
3.8 |
Log S (ESOL):? ESOL: Topological method implemented from |
-5.03 |
Solubility | 0.00302 mg/ml ; 0.00000942 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (Ali)? Ali: Topological method implemented from |
-4.65 |
Solubility | 0.00722 mg/ml ; 0.0000225 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-4.2 |
Solubility | 0.0202 mg/ml ; 0.000063 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
Yes |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.18 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
2.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
3.04 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | With bromine; In chloroform; at 20 - 50℃; | Compound 25-2 (0443) To a solution of thiophene (84 g, 1.0 mol) in chloroform (34 mL) was added dropwise bromine at rt for 3 h. When the addition was complete, the mixture was stirred at rt overnight. The mixture was heated to 50 C. for 3 h. The reaction mixture was washed with 1M NaOH (aq. 100 mL), brine (100 mL×2) respectively. The organic phase was dried with anhydrous sodium sulfate, filtered and concentrated to afford light yellow oil, which was solidified in methanol (100 mL). The solid was filtered and dried in vacuo to afford 25-2 (89 g, 56%). |
With tetrabutylammomium bromide; hydrogen bromide; dihydrogen peroxide; In water; at 25 - 75℃; for 10h;Large scale; | Thiophene was brominated to provide 2,3,5-tribromothiophene A according to the following procedure. A reactor was charged with a solution of aqueous hydrobromic acid (47.6%, 125.0 kg, 5 equiv). Thiophene (12.5 kg, purity 99%, 1 equiv) was added to it at 25- 30C. Tetrabutylammonium bromide (0.625 kg, 0.13 equiv) was added to the reaction mass. The reaction mass was heated to 50-55 C. 50%> Aqueous hydrogen peroxide solution (31.3 kg, 3.1 equiv) was added to the reaction mass over 10 h keeping the temperature in the range of 50-55 C. The reaction mass was then heated to 70-75C. After reaction completion, the reaction mass was cooled to 20-25 C and washed with 20%> sodium metabisulphite solution (17 L), 2 N sodium hydroxide solution (62 L) and the crude product was subjected to fractional distillation using a 2 ft wire-mesh packed column to afford 2,3,5-tribromothiophene A. The spectral properties of this molecule are consistent with commercially available material. ii. De-Bromination to prepare intermediate B | |
With tetrabutylammomium bromide; hydrogen bromide; dihydrogen peroxide; In water; at 25 - 75℃;Large scale; | Bromination to prepare intermediate 7:[0149j Thiophene was brominated to provide 7 according to the following procedure. A reactor was charged with a solution of aqueous hydrobromic acid (47.6%, 125.0 kg, 5 equiv). Thiophene (12.5 kg, purity 99%, 1 equiv) was added to it at 25-30C. Tetrabutylammonium bromide (0.625 kg, 0.13 equiv) was added to the reaction mass. The reaction mass was heated to 50-55 C. 50% Aqueous hydrogen peroxide solution (31.3 kg, 3.1 equiv) was added to thereaction mass over 10 h keeping the temperature in the range of 50-55 C. The reaction mass was then heated to 70-75C. After reaction completion, the reaction mass was cooled to 20- 25 C and washed with 20% sodium metabisulphite solution (17 L), 2 N sodium hydroxide solution (62 L) and the crude product was subjected to fractional distillation to afford 2,3,5- tribromothiophene. The spectral properties of this molecule are consistent with commerciallyavailable material. |
With tetrabutylammomium bromide; dihydrogen peroxide; In water; at 50 - 75℃; for 10h; | Bromination to prepare intermediate 7 15 [0158j A reactor was charged with a solution of aqueous hydrobromic acid (47.6%, 125.0 kg, 5 equiv). Thiophene (12.5 kg, purity 99%, 1 equiv) was added to it at 25-30C. Tetrabutylammonium bromide (0.625 kg, 0.13 equiv) was added to the reaction mass. The reaction mass was heated to 50-55 C. 50% Aqueous hydrogen peroxide solution (31.3 kg, 3.1 equiv) was added to the reaction mass over 10 h keeping the temperature in the range of 50-20 55 C. The reaction mass was then heated to 70-75C. After reaction completion, the reaction mass was cooled to 20-25 C and washed with 20% sodium metabisulphite solution (17 L), 2 N sodium hydroxide solution (62 L) and the crude product was subjected to fractional distillation using a 2 ft wire-mesh packed column to afford 2,3,5-tribromothiophene. The spectral properties of this molecule are consistent with commercially available material. | |
52.6 kg | a, the chloroform 35L, thiophene and 16.8 kg 0.168kg copper bromide into reactor 1, stirred for 10 minutes, in a jacketed reactor was cooled to -5 water when the tank by the dropwise addition of 65.0kg of bromine was added dropwise 6 into the reactor 1. document.write(""); B, the drum to the reaction vessel 1 with air or oxygen after start of the reaction, after completion of bromine was slowly added dropwise, and then slowly heated to reflux for 1 reactor, the gas is condensed by the reflux condenser 8 into the reactor 1 at reflux, the reaction after 3.5 hours, cooled to 23 -25 ; document.write(""); C, the ethanol solution was added dropwise to the reactor tank 1 7 added dropwise 10L0.05mol / L sodium hydroxide, the decomposition of unreacted bromine and stirred for 30 minutes.document.write(""); d, the reaction mixture was washed into the autoclave 2 was added 35L of water, stir for 30 minutes, allowed to stand, the lower organic phase into the distillation still 3 atmospheric distillation, followed by distillation gas condenser 9, distillation condenser 10 after the condensation, the first fraction prior to recycling the solvent and the solvent recovery tank 4, and then distilled under reduced pressure to 15mmHg, followed after distillation gas condenser 9, distillation condenser 10 condensed, collecting 112 ~ 116 / 15mmHg into the product fraction collected tank 5 to give colorless liquid 52.6kg2,3,5- three bromothiophene product |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium tetrahydroborate; In dimethyl sulfoxide; at 15 - 25℃; for 2h;Large scale; | Selective de-bromination of A provided 2,4 dibromothiophene B according to the following procedure. Dimethyl sulfoxide (DMSO, 330 L) was charged to reactor. 2,3,5- tribromothiophene A (33 kg, 1.0 equiv) was charged to the reaction mass under stirring. The reaction mass was cooled to 15-20C. Sodium borohydride (7.8 kg, 2.0 equiv) was charged lot wise to the reaction mass in 2. Oh maintaining temperature 15 to 20 C. The reaction mass was heated to 20 to 25C and maintained until the reaction was completed. The reaction mass was quenched in water (660 L) at 10 to 15 C and the product was extracted into toluene (5 x 165 L). The combined organic layer was washed with water (165 L). The organic layer was dried over anhydrous sodium sulfate (8.0 kg) and concentrated under reduced pressure below 50 C to yield 2,4 dibromothiophene B. The spectral properties of this molecule are consistent with commercially available material. iii. | |
With sodium tetrahydroborate; In dimethyl sulfoxide; at 15 - 25℃;Large scale; | ii. De-Bromination to prepare intermediate 8: [0151j Selective de-bromination of 7 provided 8 according to the following procedure.Dimethyl sulfoxide (DMSO, 330 L) was charged to reactor. <strong>[3141-24-0]2,3,5-tribromothiophene</strong> (33 kg, 1.0equiv) was charged to the reaction mass under stirring. The reaction mass was cooled to15-20 C. Sodium borohydride (7.8 kg, 2.0 equiv) was charged lot wise to the reaction mass in2.0 h maintaining temperature 15 to 20 C. The reaction mass was heated to 20 to 25C andmaintained until the reaction was completed. The reaction mass was quenched in water (660 L) at 10 to 15 C and the product was extracted into toluene (5 x 165 L). The combined organic layer was washed with water (165 L). The organic layer was dried over anhydrous sodium sulfate (8.0 kg) and concentrated under reduced pressure below 50 C to yield 2,4 dibromothiophene. The spectral properties of this molecule are consistent with commerciallyavailable material. | |
With sodium tetrahydroborate; In dimethylsulfoxide-d6; at 10 - 25℃; | 2. De-Bromination to prepare intermediate 8 [0159j Dimethyl sulfoxide (DMSO, 330 L) was charged to reactor. <strong>[3141-24-0]2,3,5-tribromothiophene</strong> (33 kg, 1.0 equiv) was charged to the reaction mass under stirring. The reaction mass was cooledto 15-20C. Sodium borohydride (7.8 kg, 2.0 equiv) was charged lot wise to the reaction mass in2.Oh maintaining temperature 15 to 20 C. The reaction mass was heated to 20 to 25C and maintained until the reaction was completed. The reaction mass was quenched in water (660 L) at 10 to 15 C and the product was extracted into toluene (5 x 165 L). The combined organic layer was washed with water (165 L). The organic layer was dried over anhydrous sodiumsulfate (8.0 kg) and concentrated under reduced pressure below 50 C to yield 2,4 dibromothiophene. The spectral properties of this molecule are consistent with commercially available material. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | 2,3,5-Tribromothiophene[12] (1.94 mL, 15.00 mmol,)was dissolved in anhydrous Et2O (50 mL) and cooled to -78oC. A solution of n-BuLi/hexane 2.5M (6 mL, 15 mmol,)was added dropwise and stirred for 1 h. DMF (18.0 mmol,1.4 mL) was then added dropwise at -78 oC, stirred for 1.5 hand allowed to warm to rt before quenching with saturatedNH4Cl (30 mL). The organic phase was separated andwashed with brine (2 × 15 mL), dried (Na2SO4) before thesolvents were removed in vacuo, and the product purified byflash chromatography using hexane/EtOAc 5:1 for elution;yield: 3.061 g (65%), yellow solid; mp. 97-99 oC. deltaH (300MHz, CDCl3): 9.81 (1H, s), 7.12 (1H, s); deltaC(75 MHz,CDCl3): 182.1, 139.0, 134.7, 152.5, 119; m/z (EI+): 272(M++4, 36%), 320 (M++2, 71), 268 (M+, 100). HRMS (EI+):Exact mass calculated for C5H2Br2OS+ 267.9675. Found267.9677. |