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Chemical Structure| 442127-50-6 Chemical Structure| 442127-50-6

Structure of 442127-50-6

Chemical Structure| 442127-50-6

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Product Details of [ 442127-50-6 ]

CAS No. :442127-50-6
Formula : C5H4BrClN2
M.W : 207.46
SMILES Code : NC1=NC(Cl)=CC=C1Br
MDL No. :MFCD13189343
InChI Key :OSFDXYVWIQEZHA-UHFFFAOYSA-N
Pubchem ID :52987943

Safety of [ 442127-50-6 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302-H315-H319-H335
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 442127-50-6 ] Show Less

Physicochemical Properties

Num. heavy atoms 9
Num. arom. heavy atoms 6
Fraction Csp3 0.0
Num. rotatable bonds 0
Num. H-bond acceptors 1.0
Num. H-bond donors 1.0
Molar Refractivity 41.35
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

38.91 Ų

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

1.72
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

2.16
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

2.09
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

1.6
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

2.03
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

1.92

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-2.98
Solubility 0.217 mg/ml ; 0.00105 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-2.61
Solubility 0.51 mg/ml ; 0.00246 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-3.14
Solubility 0.15 mg/ml ; 0.000724 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

Yes
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-6.03 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

0.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

1.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.83

Application In Synthesis of [ 442127-50-6 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 442127-50-6 ]

[ 442127-50-6 ] Synthesis Path-Downstream   1~19

  • 1
  • [ 442127-50-6 ]
  • [ 4637-24-5 ]
  • N'-(3-bromo-6-chloro-pyridin-2-yl)-N,N-dimethyl-formamidine [ No CAS ]
YieldReaction ConditionsOperation in experiment
100% In ethanol; for 1.25h;Heating / reflux; A.2 N'-(3-Bromo-6-chloro-pyridin-2-yl)-N,N-dimethyl-formamidine '[0329] A mixture of <strong>[442127-50-6]3-bromo-6-chloro-pyridin-2-ylamine</strong> (1.43 g, 6.89 mmol) and N5N- dimethylformamide dimethyl acetal (1.14 mL, 8.62 mmol), dissolved in ethanol (35 mL), is refluxed for 75 minutes. The reaction mixture is evaporated in vacuo affording the title compound (1.89 g, 100 %).
  • 2
  • [ 45644-21-1 ]
  • [ 442127-50-6 ]
YieldReaction ConditionsOperation in experiment
25.5% With bromine; In chloroform; at 0 - 20℃; for 16.0h; To a solution of 2-amino-6-chloropyridine (15g, 116mmol) in chloroform (600ml) was added a solution of bromine (4.2g, 965mmol) in chloroform (50ml) at 0C and the reaction mixture wasstirred at room temperature for 16h. After completion of reaction, the reaction was quenched over ice cold water; extracted to DCM and concentrated to obtain the crude compound. The crude compound was purified by silica gel column chromatography using 10% ethyl acetate in hexane as eluent to afford the title compound (6.2g, 25.5%). LCMS: m/z = 209.0 (M+1)+.
17% With bromine; In chloroform; A.1 3-Bromo-6-chloro-pyridin-2-ylamine[0328] 6-Chloro-pyridin-2-ylamine (5g, 38.89 mmol) is dissolved in chloroform (250 mL) and a solution of bromine (1.33 mL, 26 mmol) in chloroform (50 mL) is slowly added over a one hour period. During the addition a precipitate (hydrobromide salt of the starting material) forms. After stirring overnight the reaction mixture is filtered, the filtrate is evaporated and the residue is partitioned between ethyl acetate and 1 M sodium carbonate solution. The organic phase is separated, evaporated and the solid residue purified by flash chromatography (silica gel, 15 % ethyl acetate in petroleum ether) affording the title compound (1.44 g, 17 %) as a solid. The material is carried through the next three reaction steps.
  • 3
  • [ 442127-50-6 ]
  • tert-butyl N-tert-butyloxycarbonyl-6-chloro-3,3'-bipyridin-2-ylcarbamate [ No CAS ]
  • 4
  • [ 442127-50-6 ]
  • [ 1692-25-7 ]
  • 6-chloro-3,3'-bipyridin-2-amine [ No CAS ]
YieldReaction ConditionsOperation in experiment
68% With tetrakis(triphenylphosphine) palladium(0); potassium carbonate; In 1,4-dioxane; water; at 80℃; for 16.0h;Inert atmosphere; To a solution of 3-bromo-6- chloropyridin-2-amine (1 g, 4.82 mmol) in 1,4-dioxane (40 mL) and water (4 mL) were added pyridin-3-ylboronic acid (0.65 g, 5.30 mmol), potassium carbonate (1.33 g, 9.64 mmol) and tetrakis(triphenylphosphine)palladium(0) (0.56 g, 0.48 mmol). The resulting solution was stirred for 16 hours at 80 C under nitrogen atmosphere. After cooling down to ambient temperature, the resulting mixture was diluted with water (100 mL) and extracted with ethyl acetate (3 x 100 mL). The combined organic layers was washed with brine (30 mL) and dried over anhydrous sodium sulfate. After filtration, the filtrate was concentrated under reduced pressure and the residue was purified by silica gel column chromatography, eluted with 1-2% methanol in dichloromethane to afford 6-chloro-3,3'-bipyridin-2-amine as a light yellow solid: MS (ESI, m/z): 206.1 [M + 1]+; 1H NMR (400 MHz, OMSO-d6) delta 8.66 (s, 1H), 8.57 (dd, J= 2.0 Hz, 4.4 Hz, 1H), 7.84-7.82 (m, 1H), 7.48-7.45 (m, 1H), 7.38 (d, J= 7.6 Hz, 1H), 6.69 (d, J= 11.6 Hz, 1H), 6.28 (br s, 2H).
  • 5
  • [ 442127-50-6 ]
  • 5-chloro-2-(methylthio)thiazolo[4,5-b]pyridine [ No CAS ]
  • 6
  • [ 442127-50-6 ]
  • 5-chloro-2-(4-methylpiperazin-1-yl)thiazolo[4,5-b]pyridine [ No CAS ]
  • 7
  • [ 442127-50-6 ]
  • 5-chloro-2-(4-methylpiperazin-1-yl)-6-nitrothiazolo[4,5-b]pyridine [ No CAS ]
  • 8
  • [ 442127-50-6 ]
  • 2-(4-methylpiperazin-1-yl)-6-nitro-5-(piperidin-1-yl)thiazolo[4,5-b]pyridine [ No CAS ]
  • 9
  • [ 442127-50-6 ]
  • 2-(4-methylpiperazin-1-yl)-5-(piperidin-1-yl)thiazolo[4,5-b]pyridin-6-amine [ No CAS ]
  • 10
  • [ 442127-50-6 ]
  • N-(2-(4-methylpiperazin-1-yl)-5-(piperidin-1-yl)thiazolo[4,5-b]pyridin-6-yl)-2-(2-methylpyridin-4-yl)oxazole-4-carboxamide hydrochloride [ No CAS ]
  • 11
  • [ 442127-50-6 ]
  • 2-morpholino-5-(piperidin-1-yl)thiazolo[4,5-b]pyridin-6-amine [ No CAS ]
  • 12
  • [ 442127-50-6 ]
  • 2-(1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-N-(2-morpholino-5-(piperidin-1-yl)thiazolo[4,5-b]pyridin-6-yl)oxazole-4-carboxamide [ No CAS ]
  • 13
  • [ 442127-50-6 ]
  • 4-(5-chlorothiazolo[4,5-b]pyridin-2-yl)morpholine [ No CAS ]
  • 14
  • [ 442127-50-6 ]
  • 4-(5-chloro-6-nitrothiazolo[4,5-b]pyridin-2-yl)morpholine [ No CAS ]
  • 15
  • [ 442127-50-6 ]
  • 4-(6-nitro-5-(piperidin-1-yl)thiazolo[4,5-b]pyridin-2-yl)morpholine [ No CAS ]
  • 16
  • [ 442127-50-6 ]
  • N-(2-morpholino-5-(piperidin-1-yl)thiazolo[4,5-b]pyridin-6-yl)pyrazolo[1,5-a]pyrimidine-3-carboxamide [ No CAS ]
  • 17
  • [ 442127-50-6 ]
  • [ 140-89-6 ]
  • 5-chlorothiazolo[4,5-b]pyridine-2-thiol [ No CAS ]
YieldReaction ConditionsOperation in experiment
69% In N,N-dimethyl-formamide; at 150℃; for 4.0h; A solution of <strong>[442127-50-6]3-bromo-6-chloropyridin-2-amine</strong> (42g, 202mmol) and potassium ethyl xanthate (58.15g, 363mmol) in DMF (200mL) was heated at 150C for 4h. The reaction mixture was cooled to 0C, diluted with ice water, acidified with cone. HCl. The solid obtained was filtered and dried under vacuum to afford the title compound (40gm, 69%). LCMS: m/z =203.0 (M+1) +
  • 18
  • [ 1003309-09-8 ]
  • [ 442127-50-6 ]
  • 1-(4-(2-amino-6-chloropyri din-3-yl)phenyl)pyrrolidin-2-one [ No CAS ]
YieldReaction ConditionsOperation in experiment
17% With (1,1'-bis(diphenylphosphino)ferrocene)palladium(II) dichloride; potassium phosphate; In 1,4-dioxane; water; at 80℃; for 4.0h; Step 1: Preparation of l-(4-(2-amino-6-chloropyridin-3-yl)phenyl)pyrrolidin-2-one. [0815] l-(4-(4,4,5,5-tetramethyl-l,3,2-dioxaborolan-2-yl)phenyl)pyrrolidin-2-one (900 mg, 3.13 mmol), <strong>[442127-50-6]3-bromo-6-chloropyridin-2-amine</strong> (500 mg, 2.41 mmol), K3PO4 (1.53 g, 7.23 mmol) and Pd(dppf)Ch (70 mg, 0.096 mmol) were taken up in dioxane (15 mL) and H2O (3 mL). The resulting mixture was stirred at 80 C for 4 hours. A black solution was formed. LCMS showed the purity of the desired product is 48% (Rt = 0.715 min; MS Calcd: 287.1; MS Found: 287.8 [M+H]+). TLC showed the starting material was remained. The mixture was concentrated under reduced pressure. The residue was purified by Combi Flash (90% EA in PE) to give impure product (240 mg) as a yellow solid, then triturated with EA: PE = 1: 1 (10 mL) for 1 hour to give 1-(4-(2-amino-6-chloropyri din-3 -yl)phenyl)pyrrolidin-2-one (121 mg, yield: 17%) as a light yellow solid. NMR (400 MHz, CDCh) d 2.15-2.23 (2H, m), 2.64 (2H, t, J= 8.0 Hz), 3.91 (2H, t, J =7.2 Hz), 4.58 (2H, brs), 6.48 (2H, d, J= 8.0 Hz), 7.42 (2H, dd, J= 8.8, 2.0 Hz), 7.67 (2H, d, J= 8.8 Hz).
  • 19
  • [ 1003309-09-8 ]
  • [ 442127-50-6 ]
  • (S)-2-((6-amino-5-(4-(2-oxopyrrolidin-1-yl)phenyl)pyridin-2-yl)amino)-6,6a,7,8-tetrahydro-9H-pyrido[2,3-b]pyrrolo[1,2-d][1,4]oxazin-9-one [ No CAS ]
 

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